RSA

RSA(im_or_shape: numpy.array, r: int, volume_fraction: int = 1, clearance: int = 0, n_max: int = 100000, mode: str = 'contained', return_spheres: bool = False, smooth: bool = True)[source]

Generates a sphere or disk packing using Random Sequential Addition

Parameters
  • im_or_shape (ndarray or list) – To provide flexibility, this argument accepts either an image into which the spheres are inserted, or a shape which is used to create an empty image. In both cases the spheres are added as True values to the background. Since True is considered the pore space, then the added spheres represent holes.

  • r (int) – The radius of the disk or sphere to insert.

  • volume_fraction (scalar (default is 1.0)) – The fraction of the image that should be filled with spheres. The spheres are added as True’s, so each sphere addition increases the volume_fraction until the specified limit is reached. Note that if n_max is reached first, then volume_fraction will not be acheived. Also, volume_fraction is not counted correctly if the mode is 'extended'.

  • clearance (int (optional, default = 0)) – The amount of space to put between each sphere. Negative values are acceptable to create overlaps, so long as abs(clearance) < r.

  • n_max (int (default is 100,000)) – The maximum number of spheres to add. Using a low value may halt the addition process prior to reaching the specified volume_fraction. If None is given, then no limit is used.

  • mode (string (default is 'contained')) –

    Controls how the edges of the image are handled. Options are:

    ’contained’

    Spheres are all completely within the image

    ’extended’

    Spheres are allowed to extend beyond the edge of the image. In this mode the volume fraction will be less that requested since some spheres extend beyond the image, but their entire volume is counted as added for computational efficiency.

  • return_spheres (bool) – If True then an image containing only the spheres is returned rather than the input image with the spheres added, which is the default behavior.

  • smooth (bool) – Indicates whether balls should have smooth faces (True) or should include the bumps on the extremities (False).

Returns

image – An image with spheres of specified radius added to the background.

Return type

ndarray

Notes

This algorithm ensures that spheres do not overlap but does not guarantee they are tightly packed.

This function adds spheres to the background of the received im, which allows iteratively adding spheres of different radii to the unfilled space by repeatedly passing in the result of previous calls to RSA.

References

[1] Random Heterogeneous Materials, S. Torquato (2001)

Examples

Click here to view online example.