PoreSpy documentation

Installation
Basic Usage
Module and Function Reference
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General
- Converting Greyscale Images to Binary
- Opening and Preparing Images
Generators
- Tutorials
- Reference
Filters
- Tutorials
- Reference
Metrics
- Tutorials
- Reference
Networks
- Tutorials
- Reference
Simulations
- Tutorials
Tools
- Reference
Visualization
- Tutorials
  - Visualizing a tif image in Paraview
- Reference

Converting Greyscale Images to Binary
Opening and Preparing Images

Creating Multiscale Images
Generating fibrous mats
Generating Sphere Packings from Digital Rocks Portal
Making blobs

blobs
borders
bundle_of_tubes
cylinders
cylindrical_pillars_array
cylindrical_pillars_mesh
cylindrical_plug
faces
fractal_noise
insert_shape
lattice_spheres
line_segment
overlapping_spheres
polydisperse_spheres
pseudo_electrostatic_packing
pseudo_gravity_packing
ramp
random_cantor_dust
random_spheres
rectangular_pillars_array
sierpinski_foam
sierpinski_foam2
spheres_from_coords
voronoi_edges

Applying chords to 2D and 3D images
Local thickness
SNOW partitioning
SNOW partitioning parallel

Measuring fractal dimension by box-counting
The lineal path function
Obtaining the porosity profile along each principle axis
Using regionprops_3d to analyze properties of each pore

boxcount
chord_counts
chord_length_distribution
find_h
lineal_path_distribution
mesh_volume
mesh_surface_area
pc_curve
phase_fraction
pore_size_distribution
porosity
porosity_profile
props_to_DataFrame
props_to_image
radial_density_distribution
region_interface_areas
region_surface_areas
region_volumes
regionprops_3D
representative_elementary_volume
satn_profile
two_point_correlation

Adding boundary pores
Predicting diffusive size factors of a rock sample
SNOW network extraction (advanced)
SNOW network extraction
Using AI based diffusive size factors for extracted networks

add_boundary_regions
diffusive_size_factor_AI
diffusive_size_factor_DNS
label_boundaries
label_phases
map_to_regions
regions_to_network
snow2

Details of Drainage Simulations with and without Gravity
Basics of Peforming Drainage Simulations with and without Gravity
Finding the Tortuosity ( \(\tau\) ) of an Image Using tortuosity_fd
Image-based invasion percoalation
Determining tortuosity using geometric domain decomposition

align_image_with_openpnm
bbox_to_slices
extend_slice [WIP]
extract_cylinder
extract_regions
extract_subsection
get_border
get_planes
insert_cylinder
insert_sphere
isolate_object [WIP]
make_contiguous
marching_map [WIP]
mesh_region [WIP]
norm_to_uniform
overlay
randomize_colors [WIP]
recombine [WIP]
subdivide
unpad

Visualizing a tif image in Paraview

bar
imshow
prep_for_imshow
satn_to_movie
satn_to_panels
sem
set_mpl_style
show_3D
show_mesh
show_panels
show_planes
xray

`isolate_object` [WIP]#

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